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Analysis of in-vivo NMR spectra

Working Group 8.42

In vivo NMR spectroscopy (Working Group 8.12) aims at the non-invasive quantitation of metabolite concentrations, e.g. in the brain. Figure 1 shows a part of a 1H-NMR spectrum corresponding to a selected voxel in the human brain.

Fig. 1:  Selected voxel in the human brain and 1H-NMR spectrum.
Fig. 1: Selected voxel in the human brain and 1H-NMR spectrum.

  

Resonances of individual metabolites, such as N-acetylaspartate (NAA), can be described by parametric models. However, often a baseline, e.g. due to macromolecule resonances, makes analysis of the spectra difficult. Usually no knowledge is available about a (parametric) model for this baseline, and hence the spectra are described by a semi-parametric model. The non-parametric part of this model, namely the baseline, can be assumed to be smooth. Current work focuses on accurate model estimation and, in particular, on the determination of uncertainties. Figure 1 illustrates the non-parametric estimation of the baseline by a regularization approach.

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Publications

C. Elster, F. Schubert, A. Link, M. Walzel, F. Seifert and H. Rinneberg
Magnetic resonance in medicine, 53(6),
1288--96,
2005.
F. Schubert, C. Elster, A. Link, F. Seifert, M. Walzel and H. Rinneberg
Proc. Intl. Soc. Magnet. Reson. Med
2004.
F. Schubert, F. Seifert, C. Elster, A. Link, M. Walzel, S. Mientus, J. Haas and H. Rinneberg
Magnetic Resonance Materials in Physics, Biology and Medicine, 14(3),
213 - 222,
2002.
C. Elster, A. Link, F. Schubert, F. Seifert, M. Walzel, D. Richter and H. Rinneberg
In P. Ciarlini, M.G. Cox, E. Filipe, F. Pavese, D. Richter, editor, Volume Advanced Mathematical & Computational Tools in Metrology V of Series on Advances in Mathematics for Applied Sciences
page 134-141
Publisher: World Scientific Singapore,
57 edition
2001.
C. Elster, A. Link, F. Schubert, F. Seifert, M. Walzel and H. Rinneberg
Magnetic Resonance Imaging, 18(5),
597 - 606,
2000.
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